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  1. Home > Articles & Issues >
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  3. When Many Trees Go t ...
Article

When Many Trees Go to War: On Sets of Phylogenetic Trees With Almost No Common Structure

Mathias Weller ORCID (1) (2), Norbert Zeh ORCID (3)
(1) Laboratoire d'Informatique Gaspard-Monge [LIGM]
(2) Centre National de la Recherche Scientifique [CNRS]
(3) Dalhousie University
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Open on arXiv
Submitted on
September 2, 2025
Accepted on
February 8, 2026
Published on
March 10, 2026
Last modified on
March 10, 2026
Volume 28
vol. 28:2
Combinatorics
DOI
10.46298/dmtcs.16446
License
Attribution 4.0 International (CC BY 4.0)
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317
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261
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When Many Trees Go to War: On Sets of Phylogenetic Trees With Almost No Common Structure

Mathias Weller ORCID (1) (2), Norbert Zeh ORCID (3)
(1) Laboratoire d'Informatique Gaspard-Monge [LIGM]
(2) Centre National de la Recherche Scientifique [CNRS]
(3) Dalhousie University
Abstract
It is known that any two trees on the same $n$ leaves can be displayed by a network with $n-2$ reticulations, and there are two trees that cannot be displayed by a network with fewer reticulations. But how many reticulations are needed to display multiple trees? For any set of $t$ trees on $n$ leaves, there is a trivial network with $(t - 1)n$ reticulations that displays them. To do better, we have to exploit common structure of the trees to embed non-trivial subtrees of different trees into the same part of the network. In this paper, we show that for $t \in o(\sqrt{\lg n})$, there is a set of $t$ trees with virtually no common structure that could be exploited. More precisely, we show for any $t\in o(\sqrt{\lg n})$, there are $t$ trees such that any network displaying them has $(t-1)n - o(n)$ reticulations. For $t \in o(\lg n)$, we obtain a slightly weaker bound. We also prove that already for $t = c\lg n$, for any constant $c > 0$, there is a set of $t$ trees that cannot be displayed by a network with $o(n \lg n)$ reticulations, matching up to constant factors the known upper bound of $O(n \lg n)$ reticulations sufficient to display \emph{all} trees with $n$ leaves. These results are based on simple counting arguments and extend to unrooted networks and trees.
Keywords
  • Combinatorics
  • Discrete Mathematics
  • Quantitative Methods
  • 05C20
  • G.2.1
Mathematics Subject Classification 2020
  • 05C05 - Trees
  • 05C20 - Directed graphs (digraphs), tournaments
  • 05C82 - Small world graphs, complex networks (graph-theoretic aspects)
  • 92D10 - Genetics and epigenetics
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